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2021-08-19 09:09 2021-08-19 09:09:11
Sample annotation
2021-08-19 09:09 2021-08-19 09:09:15 2021-08-19 09:09:15 , Wait 0s , Run 7m 45s
Projection pipeline (33/26) Downsampled to 5000 cells Data loaded [ 41861 genes, 30024 cells] Reference atlas loaded Using assay RNA for patient1 3395 out of 5000 ( 68% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient1 to reference map for batch-correction Using assay RNA for patient2 425 out of 492 ( 86% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient2 to reference map for batch-correction Using assay RNA for patient3 4261 out of 5000 ( 85% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient3 to reference map for batch-correction Using assay RNA for patient4 4242 out of 4956 ( 86% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient4 to reference map for batch-correction Using assay RNA for patient5 3457 out of 4576 ( 76% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient5 to reference map for batch-correction Using assay RNA for patient6 4007 out of 5000 ( 80% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient6 to reference map for batch-correction Using assay RNA for patient7 2526 out of 5000 ( 51% ) non-pure target cells removed Transforming expression matrix into space of mouse orthologs Aligning patient7 to reference map for batch-correction Data projected Cell states predicted
Mem: 2.5Mb, Swap: 0b
2021-08-19 14:31 2021-08-19 14:31:08 2021-08-19 14:31:08 , Wait 0s , Run 19s
Custom radar plots (3/3) Reference loaded Data loaded Radar plots generated
Mem: 2.5Mb, Swap: 0b